Exploration
π§ My Informatics Skills
I apply a wide range of bioinformatics tools and pipelines for virus discovery, genome assembly, and data visualization.
𧬠Genomic Data Analysis
Experienced in processing RNA-seq, small RNA-seq, and viral metagenomic data using tools like STAR, Salmon, and SPAdes.
π§ͺ Bioinformatics Pipelines
Built reproducible workflows using Snakemake and conda environments for virome profiling and genome annotation.
π Data Visualization
Visualization with ggplot2, GraphPad, and R Shiny to interpret and present complex data sets effectively.
π Virus Discovery
Specialized in viral sequence mining from host transcriptomes, using DIAMOND BLASTx and custom viral domain annotation.